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  • Faculty of Biology, Medicine and Health
  • Research
  • Technology platforms
  • Electron microscopy
  • Faculty of Biology, Medicine and Health
  • Research
  • Technology platforms
    • Bioimaging
    • Bioinformatics and computation
    • Biological services
    • Biomolecular analysis
    • Clinical and preclinical imaging
    • Electron microscopy
    • Flow cytometry
    • Genome editing
    • Genomic technologies
    • Histology
    • Mass spectrometry

Electron microscopy

Cutting-edge visualisation from cells to molecules

The Electron Microscopy Core Facility provides both state-of-the-art instrumentation and experienced staff to assist researchers and students to obtain high-resolution microscopy data.

We offer a reliable, high-quality support for electron microscopy studies. In addition, we provide full-scale comprehensive training in any aspects of biological electron microscopy that exist within our facility.

Our services are available to all researchers and students within The University of Manchester. They are also available, by arrangement, to external groups.

 

On this page:

  • How we work
  • Applications
  • Technologies and equipment
  • Publications and outputs
  • External access
  • Contact us
  • Other technology platforms

How we work

Bespoke support

We offer tailored support, from simple sample analysis to more extensive initial assessments, project design, pilot experiments and comprehensive user training for larger projects.

Dedicated staff

The facility is staffed by two senior experimental officers and two technicians who are actively involved in research and who will also train and assist both staff and students in all aspects of electron microscopy.

Researcher using an electron microscope.

Our approach

We provide expert evaluation of the feasibility and optimal approach to each proposed electron microscopy project because of the specialist nature of the information required.

A slide under the electron microscope.

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Applications

Available methodologies

The facility is well equipped for a wide range of methodologies for biological electron microscopy.

Typical applications include:

Routine transmission electron microscopy

A TEM image of a larvae.

Single particle analysis

Structure of a particle.

Volume electron microscopy

Volume electron microscopy image of an egg.

Correlative light-electron microscopy

Correlative light-electron microscopy image.

Immuno electron microscopy

Collagen.

Scanning electron microscopy

Anabaena azollae under a SEM.

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Technologies and equipment

Supporting current techniques

We invest in an extensive range of technology platforms and equipment to provide the most up-to-date techniques.

Cryo electron microscope that has autoloader for EM grids and capable of automatic image acquisition with Falcon 3EC direct electron detector. This instrument can be used for data acquisition or grid screening for further analysis at eBIC (Diamond Light Source), with which we have close connections and regular access.

Backbone transmission electron microscope with fast and reliable CMOS Ceta camera, variety of STEM detectors (BD, DF, HAADF), LaB6 electron source, modern software for tomography, montage, CLEM and automatic image acquisition.

Multiplex role electron microscope combining high resolution FEG-based scanning electron microscope with VolumeScope serial block face imaging system and Array Tomography software package.

  • Ultramicrotomes, including cryo ultramicrotomes.
  • Vitrobot Mk IV plunge freezer
  • HPF Compact 03 high pressure freezer
  • Leica AFS2 freeze substitution machine
  • Carbon and sputter coaters
  • Glow dischargers

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Publications and outputs

Contributing to high impact outputs

The Electron Microscopy core facility has been instrumental in research leading to top-class outputs.

Here is a small selection of key publications we have contributed to.

Nature Communications, 2024.

Significant Plastid Terminal Oxidase activity is induced in response to high light in the model plant species Eutrema salsugineum and Arabidopsis thaliana. Its activation protects against photoinhibition of Photosystem II and reduces reactive oxygen production under stress conditions showing its role as a photoprotective safety valve for photosynthesis.

  • DOI: 10.1038/s41467-023-44454-x

Nature Structural and Molecular Biology, 2023.

A detailed structural analysis of native fibrillin microfibrils from mammalian tissue by cryogenic electron microscopy. Establishing that in complex extracellular assemblies, such as fibrillin microfibrils, mutations may have long-range structural consequences leading to the disruption of growth factor signaling and the development of disease.

  • DOI: 10.1038/s41594-023-00950-8

Proceedings of the National Academy of Sciences of the United States of America, 2022.

Description of the key nonredundant amino acids in the dominant epitope of PLA2R involved in autoantibody binding related to membranous nephropathy autoimmune kidney disease. Also, the high-resolution structure of PLA2R to 3.4 Å resolution by using cryo-electron microscopy is reported.

  • DOI: 10.1073/pnas.2202209119

Kidney International, 2022.

Development of NL-D3 transgenic zebrafish as a robust and quantifiable proteinuria reporter that will permit screening for drugs that ameliorate proteinuria, thereby prioritizing candidates for further translational studies.

  • DOI: 10.1016/j.kint.2022.05.019

Nature Materials, 2021.

Description of fully synthetic hydrogel extracellular matrix designed to elicit key phenotypic traits of the pancreatic environment in culture. This model recapitulates a pathologically remodelled tumour microenvironment for studies of normal and pancreatic cancer cells in vitro.

  • DOI: 10.1038/s41563-021-01085-1

Scientific Reports, 2020

Extensive morphological characterisation of nematode surface layer using combination of electron microscopy techniques available in the facility including correlative X-ray CT and electron microscopy.

  • DOI: 10.1038/s41598-020-61916-0

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External access

Working with other academic institutions and industry

Although primarily focused on supporting research at The University of Manchester, we are also able to support work from other academic institutions and industry.

Academic institutions

We are happy to provide access to our systems to users from any academic institution.

We will provide these users with the same level of training and support as we would for our internal users.

Please contact us for further details.

Email: aleksandr.mironov@manchester.ac.uk

A researcher using a microscope.

Industry

We have worked for a number of multinational companies, both on an individual basis and as part of packages of work involving multiple facilities. Work may be on a collaborative basis or purely as a service provision.

All work is fully documented and contractual, and non-disclosure compliance is assured.

If you are interested in accessing the facility please contact our Business Development Manager for further details:

Dr Joanne Flannelly
Email: joanne.flannelly@manchester.ac.uk

Close up of a microscope.

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Contact us

Find out more

Get in touch for further information or to inquire about using our facility.

Dr Aleksandr Mironov, Senior Experimental Officer and Facility Manager

Email: aleksandr.mironov@manchester.ac.uk
Tel: +44 (0)161 275 5645

Electron Microscopy Core Facility
Faculty of Biology, Medicine and Health
Michael Smith Building
The University of Manchester
M13 9PT

Maps and travel

The Electron Microscopy Core Facility is located on the ground floor in A/D hub of the Michael Smith Building (Building 71 on the University campus map).

See: University maps and travel section

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Technology platforms

Technology platforms

We have a pioneering environment and facilities for research, innovation and technology development.

Technology platforms main page

Molecular

  • Biomolecular analysis
  • Electron microscopy
  • Genomic technologies
  • Mass spectrometry

Cellular

  • Bioimaging
  • Flow cytometry
  • Genome editing

Organismal

  • Biological services
  • Clinical and pre-clinical imaging
  • Fly Facility
  • Histology
  • Manchester Clinical Research Facility (MCRF)

Cross facility support

  • Bioinformatics and computation

Contact us

  • +44 (0) 161 306 6000
  • Contact details

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The University of Manchester
Oxford Rd
Manchester
M13 9PL
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